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58. Generic Substrate and Salmon Spawning

, mbayly

Salmon (generalized)

Substrate

Substrate Class Categorical (see notes)

Adult Spawners

Spawning

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

63. Generic Substrate and Salmon/Trout Rearing

, mbayly

Salmon/Trout (generalized)

Substrate

Substrate Class Categorical (see notes)

Adults, Juvenile

Rearing

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

70. Generic Substrate and Sockeye Salmon

, mbayly

Sockeye Salmon

Oncorhynchus nerka

Substrate

Substrate Class Categorical (see notes)

Adult Spawners

Spawning

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

59. Generic Substrate and Steelhead Spawning

, mbayly

Steelhead (generalized)

Substrate

Substrate Class Categorical (see notes)

Adult Spawners

Spawning

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

64. Generic Substrate and Whitefish Rearing

, mbayly

Whitefish (generalized)

Substrate

Substrate Class Categorical (see notes)

Juvenile

Rearing

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

65. Generic Substrate and Whitefish Rearing

, mbayly

Whitefish (generalized)

Substrate

Substrate Class Categorical (see notes)

Adults

Rearing

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

62. Generic Substrate and Whitefish Spawning

, mbayly

Whitefish (generalized)

Substrate

Substrate Class Categorical (see notes)

Adult Spawners

Spawning

Washington

Beecher, H., Caldwell, B. (2022). INSTREAM FLOW STUDY GUIDELINES. Technical and Habitat Suitability Issues Including Fish Preference Curves. UPDATED, January 25, 2022. 04-11-007

HSI

181. Habitat loss and Athabasca Rainbow Trout

, mbakken

Athabasca Rainbow Trout

Oncorhynchus mykiss

Habitat loss

Stream habitat loss % of stream habitat lost

adult

All seasons All activities

Alberta foothills watersheds, excluding National Parks

Government of Alberta. 2024. Direct habitat loss stressor-response function for Athabasca Rainbow Trout, Westslope Cutthroat Trout, and Bull Trout. Environment and Protected Area Native Trout Cumulative Effects Model.

System capacity

193. Habitat Loss and Bull Trout

, mbakken

Bull Trout

Salvelinus confluentus

Habitat loss

Direct habitat loss % lost

adult

All seasons All activities

Alberta foothills watersheds, excluding National Parks

Government of Alberta. 2024. Direct habitat loss stressor-response function for Athabasca Rainbow Trout, Westslope Cutthroat Trout, and Bull Trout. Environment and Protected Area Native Trout Cumulative Effects Model.

System capacity

Plains Sucker

Pantosteus jordani

Habitat loss

Total habitat loss % lost

adult

All seasons All activities

Saskatchewan

Jarvis, L. 2022. Habitat loss stressor-response function for Plains Sucker. Department of Fisheries and Oceans CEMPRA model for Plains Sucker.

Survival

205. Habitat Loss and Westslope Cutthroat Trout

, mbakken

Westslope Cutthroat Trout

Oncorhynchus clarkii lewisi

Habitat loss

Direct habitat loss % lost

adult

All seasons All activities

Alberta foothills watersheds, excluding National Parks

Government of Alberta. 2024. Direct habitat loss stressor-response function for Athabasca Rainbow Trout, Westslope Cutthroat Trout, and Bull Trout. Environment and Protected Area Native Trout Cumulative Effects Model.

System capacity

Chinook Salmon

(Oncorhynchus tshawytscha

Fines

Fine Coverage of the Substrate <1.7mm Fine Coverage (%)

Egg

Incubation Incubation

Idaho and Washington

Honea, J. M., Jorgensen, J. C., McCLURE, M. M., Cooney, T. D., Engie, K., Holzer, D. M., & Hilborn, R. (2009). Evaluating habitat effects on population status: influence of habitat restoration on spring‐run Chinook salmon. Freshwater Biology, 54(7), 1576-1592. Tappel P.D. & Bjornn T.C. (1983) A new method of relating size of spawning gravel to salmonid embryo survival. North American Journal of Fisheries Management, 2, 123–135.

Survivorship

Chinook Salmon

Oncorhynchus tshawytscha

Pool Habitat

Pool area covered by cobbles and boulders %

Chinook Salmon

Oncorhynchus tshawytscha

Temperature

Mean of Daily Maximum Temperatures (Aug-Sept) C

Spawner

Spring, Spawning Season Spawning

Honea, J. M., Jorgensen, J. C., McCLURE, M. M., Cooney, T. D., Engie, K., Holzer, D. M., & Hilborn, R. (2009). Evaluating habitat effects on population status: influence of habitat restoration on spring‐run Chinook salmon. Freshwater Biology, 54(7), 1576-1592. Cramer, S. P. (2001). The relationship of stream habitat features to potential for production of four salmonid species. SP Cramer and Associates, Gresham, Oregon.

Survivorship

Coho Salmon

Oncorhynchus kisutch

Area

Impervious Area %

Beechie, T. J., C. Nicol, C. Fogel, J. Jorgensen, J. Thompson, G. Seixas, J. Chamberlin, J. Hall, B. Timpane-Padgham, P. Kiffney, S. Kubo, and J. Keaton. 2021. Modeling Effects of Habitat Change and Restoration Alternatives on Salmon in the Chehalis River Basin Using a Salmonid Life-Cycle Model. U.S. Department of Commerce, NOAA Contract Report NMFS-NWFSC-CR-2021-01. Feist, B. E., E. R. Buhle, P. Arnold. J. W. Davis, and N. L. Scholz. 2011. Landscape ecotoxicology of coho salmon spawner mortality in urban streams. PLoS ONE 6(8):e23424, doi:10.1371/journal.pone.0023424

survivorship

Chinook Salmon

Oncorhynchus tshawytscha

Temperature

Incubation Temperature °C

Fry, Alevin

Winter/Spring Emergence

Laboratory Experiment

Bratovich, P., M. Neal, A. Ransom, P. Bedore, and M. Bryan. 2020. Chinook Salmon Early Lifestage Survival & Folsom Dam Power Bypass Considerations. Prepared for the Sacramento Water Forum. September 2020. Jager, H. I. 2011. Quantifying Temperature Effects on Fall Chinook Salmon. ORNL/TM2011/456.

Survival

Chinook Salmon

Oncorhynchus tshawytscha

Temperature

Incubation Temperature °C

Egg

Winter/Spring Incubation

Laboratory Experiment

Bratovich, P., M. Neal, A. Ransom, P. Bedore, and M. Bryan. 2020. Chinook Salmon Early Lifestage Survival & Folsom Dam Power Bypass Considerations. Prepared for the Sacramento Water Forum. September 2020. Jager, H. I. 2011. Quantifying Temperature Effects on Fall Chinook Salmon. ORNL/TM2011/456.

Survival

Pacific salmon (generalized)

Sedimentation

Fine Sediment % fines (0.85mm)

Egg

Incubation

Pacific Northwest

Beechie, T. J., C. Nicol, C. Fogel, J. Jorgensen, J. Thompson, G. Seixas, J. Chamberlin, J. Hall, B. Timpane-Padgham, P. Kiffney, S. Kubo, and J. Keaton. 2021. Modeling Effects of Habitat Change and Restoration Alternatives on Salmon in the Chehalis River Basin Using a Salmonid Life-Cycle Model. U.S. Department of Commerce, NOAA Contract Report NMFS-NWFSC-CR-2021-01. Jensen, D. W., E. A. Steel, A. H. Fullerton, and G. R. Pess. 2009. Impact of fine sediment on incubation survival of Pacific salmon: a meta-analysis of published studies. Reviews in Fisheries Science 17(3):348-359.

Survivorship

Chinook Salmon (stream type chinook)

Oncorhynchus tshawytscha

Temperature

mean daily temperature C

Fry

McHugh, P., Budy, P., & Schaller, H. (2004). A model-based assessment of the potential response of Snake River spring–summer Chinook salmon to habitat improvements. Transactions of the American Fisheries Society, 133(3), 622-638. Honea, J. M., Jorgensen, J. C., McCLURE, M. M., Cooney, T. D., Engie, K., Holzer, D. M., & Hilborn, R. (2009). Evaluating habitat effects on population status: influence of habitat restoration on spring‐run Chinook salmon. Freshwater Biology, 54(7), 1576-1592.

Survivorship

221. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Catamaran Brook, NB, Canada

Cunjak, R.A., Linnansaari, T., and Caissie, D. 2013. The complex interaction of ecology and hydrology in a small catchment: a salmon's perspective. Hydrol. Process. 27: 741-749.

Abundance

222. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Egg

Winter

Catamaran Brook, NB, Canada

Cunjak, R.A., Linnansaari, T., and Caissie, D. 2013. The complex interaction of ecology and hydrology in a small catchment: a salmon's perspective. Hydrol. Process. 27: 741-749.

Survival

223. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Juvenile

Winter

Catamaran Brook, NB, Canada

Cunjak, R.A., Linnansaari, T., and Caissie, D. 2013. The complex interaction of ecology and hydrology in a small catchment: a salmon's perspective. Hydrol. Process. 27: 741-749.

Density change (%)

224. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Smolt

Winter

Catamaran Brook, NB, Canada

Cunjak, R.A., Linnansaari, T., and Caissie, D. 2013. The complex interaction of ecology and hydrology in a small catchment: a salmon's perspective. Hydrol. Process. 27: 741-749.

Abundance

225. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

0+

Summer

Catamaran Brook, NB, Canada

Cunjak, R.A., Linnansaari, T., and Caissie, D. 2013. The complex interaction of ecology and hydrology in a small catchment: a salmon's perspective. Hydrol. Process. 27: 741-749.

Density change (%)

230. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Smolt

Winter

River Orkla, Norway

Hvidsten, N.A., Diserud, O.H., Jensen, A.J., Jensas, J.G., Johnsen, B.O., and Ugedal, O. 2015. Water discharge affects Atlantic salmon Salmo salar smolt production: a 27 year study in the River Orkla, Norway. J. Fish. Biol. 86: 92-104.

Total annual smolt production per 100m2

234. Mean Annual Discharge and Atlantic Salmon

, mbakken

Atlantic Salmon

Salmo salar

Flow

Mean Annual Discharge (MAD) %

Juvenile

Oct-March

River Kiiminkijoki, Finland

Koljonen, S., Huusko, A., Maki-Petays, A., Louhi, P., and Muotka, T. 2013. Assessing habitat suitability for juvenile Atlantic salmon in relation to in-stream restoration and discharge variability. Restoration Ecology 21:344-352

Mean density per m2

238. Mean Annual Discharge and Brook Trout

, mbakken

Brook Trout

Salvelinus fontinalis

Flow

Mean Annual Discharge (MAD) %

Juvenile, Adults

Spring to Fall

Hunt Creek, Michigan, USA

Andrew J. Nuhfer, Troy G. Zorn, Todd C. Wills. 2017. Effects of reduced summer flows on the brook trout population and temperatures of a groundwater-influenced stream. Ecology of Freshwater Fish 2017: 26: 108–119.

Density

239. Mean Annual Discharge and Brook Trout

, mbakken

Brook Trout

Salvelinus fontinalis

Flow

Mean Annual Discharge (MAD) %

Juvenile, Adults

Spring to Fall

Hunt Creek, Michigan, USA

Andrew J. Nuhfer, Troy G. Zorn, Todd C. Wills. 2017. Effects of reduced summer flows on the brook trout population and temperatures of a groundwater-influenced stream. Ecology of Freshwater Fish 2017: 26: 108–119.

Growth

241. Mean Annual Discharge and Brown Trout

, mbakken

Brown Trout

Salmo trutta

Flow

Mean Annual Discharge (MAD) %

Juvenile, Adults

Summer

River Lhomme, Belgium

Ovidio, M., Capra, H., and Philippart, J-C. 2008. Regulated discharge produces substantial demographic changes on four typical fish species of a small salmonid stream. Hydriobiologia 609:59-70.

Biomass

248. Mean Annual Discharge and Brown Trout

, mbakken

Brown Trout

Salmo trutta

Flow

Mean Annual Discharge (MAD) %

adult

All seasons

Colorado Rocky Mountain Streams

Wilding, T.K., Bledsoe, B., Poff, N.L., and Sanderson, J. 2013. Predicting habitat response to flow using generalized habitat models for trout in Rocky Mountain Streams. River Res. Applic. DOI: 10.1002/rra

Large Brown Trout/km

251. Mean Annual Discharge and Brown Trout

, mbakken

Brown Trout

Salmo trutta

Flow

Mean Annual Discharge (MAD) %

1+

All seasons All activities

Arkansas, Gunnison, Rio Grande, South Platte and Cache la Poudre

Wilding, T.K., and Poff, L. 2008. Flow-ecology relationships for the watershed flow evaluation tool: Appendix B. 49pp.

Density standardized to site maximum

214. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

Fall-Early Summer

Lehmi River, Washington, USA

Arthaud, D.L., Greene, C.M., Guilbault, K., and Morrow, J.V. Jr. 2010. Contrasting life-cycle impacts of stream flow on two Chinook salmon populations. Hydrobiologia 655: 171-188.

Egg-smolt survival

215. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

Fall-Early Summer

Marsh Creek, Washington, USA

"Arthaud, D.L., Greene, C.M., Guilbault, K., and Morrow, J.V. Jr. 2010. Contrasting life-cycle impacts of stream flow on two Chinook salmon populations. Hydrobiologia 655: 171-188."

Egg-smolt survival

218. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

Late Summer

Cheakamus River, BC, Canada

BC Hydro Campbell River Water Use Plan

YOY abundance

219. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

January

Cheakamus River, BC, Canada

BC Hydro Campbell River Water Use Plan

YOY abundance

236. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

Apr-Sept

Chena River, Alaska, USA

Neuswanger, J.R., Wipfli, M.S., Evenson, M.J., Hughes, N.F., and Rosenberger, A.E. Low productivity of Chinook salmon strongly correlates with high summer stream discharge in two Alaskan rivers in the Yukon drainage. Can. J. Fish. Aquat. Sci. 72: 1125–1137 (2015) dx.doi.org/10.1139/cjfas-2014-0498

Residual recruits (Ricker stock-recruit curve)

237. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Juvenile

Apr-Sept

Salcha River, Alaska, USA

Neuswanger, J.R., Wipfli, M.S., Evenson, M.J., Hughes, N.F., and Rosenberger, A.E. Low productivity of Chinook salmon strongly correlates with high summer stream discharge in two Alaskan rivers in the Yukon drainage. Can. J. Fish. Aquat. Sci. 72: 1125–1137 (2015) dx.doi.org/10.1139/cjfas-2014-0498

Residual recruits (Ricker stock-recruit curve)

246. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

YOY recruits

All seasons Rearing

Nicola River, BC, Canada

Warkentin, L., Parken, C.K., Bailey, R., and Moore, J.W. 2022. Low summer river flows associated with low productivity of Chinook salmon in a watershed with shifting hydrology. Ecol. Solut. Evid. 3:e12124.

Residual recruits

247. Mean Annual Discharge and Chinook Salmon

, mbakken

Chinook Salmon

Oncorhynchus tshawytscha

Flow

Mean Annual Discharge (MAD) %

Adults

All seasons Spawning

Nicola River, BC, Canada

Warkentin, L., Parken, C.K., Bailey, R., and Moore, J.W. 2022. Low summer river flows associated with low productivity of Chinook salmon in a watershed with shifting hydrology. Ecol. Solut. Evid. 3:e12124.

Total number of spawners

Coastal Cutthroat Trout

Oncorhynchus clarkii clarki

Flow

Mean Annual Discharge (MAD) %

Adults

All seasons

Irely Creek, Washington, USA

Vadas, R.L. Jr., Beecher, H.A., Boessow, S.N., and Kohr, J.H. 2016. Coastal cutthroat trout redd counts impacted by natural water supply variations. North Am. J. Fish. Manag. 36:900-912.

% change from the previous year in estimated total redds

243. Mean Annual Discharge and Coho Salmon

, mbakken

Coho Salmon

Oncorhynchus kisutch

Smolt

Summer

Bingham Creek, Washington, USA

Rosenfeld, J.S., Beecher, H., and Ptolemy, R. 2016. Developing bioenergetic-based habitat suitability curves to improve the biological accuracy of instream flow models. North American Journal of Fisheries Management 36:1205-1219

Total outmigrating smolts

240. Mean Annual Discharge and Grayling

, mbakken

Grayling

Thymallus arcticus

Flow

Mean Annual Discharge (MAD) %

Juvenile, Adults

Summer

River Lhomme, Belgium

Ovidio, M., Capra, H., and Philippart, J-C. 2008. Regulated discharge produces substantial demographic changes on four typical fish species of a small salmonid stream. Hydriobiologia 609:59-70.

Biomass

217. Mean Annual Discharge and Pink Salmon

, mbakken

Pink Salmon

Oncorhynchus gorbuscha

Flow

Mean Annual Discharge %

Juvenile

Late Summer

Cheakamus River, BC, Canada

Data extracted from Cheakamus River Water Use Plan Report

Residuals + mean (fish/m2)

220. Mean Annual Discharge and Rainbow Trout

, mbakken

Rainbow Trout

Oncorhynchus mykiss

Flow

Mean Annual Discharge (MAD) %

Juvenile

Summer

Cheakamus River, BC, Canada

Data extracted from Cheakamus River Water Use Plan Report; MAD obtained through Water Survey of Canada

Density

229. Mean Annual Discharge and Rainbow Trout

, mbakken

Rainbow Trout

Oncorhynchus mykiss

Flow

Mean Annual Discharge (MAD) %

All life stages

May-Sept

Harrison Lake watershed, British Columbia, Canada

Hocking, M.D., Faulkner, S.G., Akaoka, K., Harwood, A., Hatfield, T., and Lewis, F.J.A. 2021. Surprising salmonid response to water diversion at four run-of-river hydroelectric projects in British Columbia. Can. J. Fish. Aquat. Sci. 78: 1383-1396.

Biomass

231. Mean Annual Discharge and Rainbow Trout

, mbakken

232. Mean Annual Discharge and Rainbow Trout

, mbakken

Rainbow Trout

Oncorhynchus mykiss

Flow

Mean Annual Discharge (MAD) %

Fry, Parr

August

Jordan River, BC, Canada

BC Hydro Jordan River Water Use Plan

Mean density per m-2

235. Mean Annual Discharge and Rainbow Trout

, mbakken

Rainbow Trout

Oncorhynchus mykiss

Flow

Mean Annual Discharge (MAD) %

Age-0

Jan-March

Snake River, Idaho, USA

Mitro, M.G., Zale, A.V., and Rich, B.A. 2003. The relation between age-0 rainbow trout (Oncorhynchus mykiss) abundance and winter discharge in a regulated river. Can. J. Fish. Aquat. Sci. 60: 135-139.

Abundance

216. Mean Annual Discharge and Steelhead

, mbakken

Steelhead

Oncorhynchus mykiss irideus

Flow

Mean Annual Discharge (MAD) %

Juvenile

Late Summer

Salmon River, BC, Canada

Data extracted from Campbell River Water Use Plan Report

Residuals + mean (fish/m2)

226. Mean Annual Discharge and Steelhead

, mbakken

Steelhead

Oncorhynchus mykiss irideus

Flow

Mean Annual Discharge (MAD) %

Juvenile

Summer

Maacama Creek, Mark West Creek, Santa Rosa Creek, Green Valley Creek. California, USA

Grantham, T.E., Newburn, D.A., McCarthy, M.A., and Merenlender, A.M. 2012. The role of streamflow and land use in limiting oversummer survival of juvenile steelhead in California streams. Trans. Am. Fish. Soc. 141:585-598.

Over-summer survival